MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus saprophyticus
19428wB1_WM06
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 40
bases: 2,926,943 bps
CDS: 2,726
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,795
Total number of protein coding genes annotated/found:
2,726
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5041|JADGLJ010000009.1
SEQF5041_02793
Genome Viewer
NA
AA
450/150
93972-94421
Protein SprT-like protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02792
Genome Viewer
NA
AA
2151/717
91829-93979
Protein YhgF
SEQF5041|JADGLJ010000009.1
SEQF5041_02791
Genome Viewer
NA
AA
771/257
90912-91682
RNA polymerase sigma-B factor
SEQF5041|JADGLJ010000009.1
SEQF5041_02790
Genome Viewer
NA
AA
483/161
90455-90937
Serine-protein kinase RsbW
SEQF5041|JADGLJ010000009.1
SEQF5041_02789
Genome Viewer
NA
AA
327/109
90127-90453
Anti-sigma-B factor antagonist
SEQF5041|JADGLJ010000009.1
SEQF5041_02788
Genome Viewer
NA
AA
1002/334
89046-90047
Phosphoserine phosphatase RsbU
SEQF5041|JADGLJ010000009.1
SEQF5041_02787
Genome Viewer
NA
AA
363/121
88334-88696
Endoribonuclease MazF
SEQF5041|JADGLJ010000009.1
SEQF5041_02786
Genome Viewer
NA
AA
171/57
88167-88337
Antitoxin MazE
SEQF5041|JADGLJ010000009.1
SEQF5041_02785
Genome Viewer
NA
AA
1149/383
86931-88079
Alanine racemase 1
SEQF5041|JADGLJ010000009.1
SEQF5041_02784
Genome Viewer
NA
AA
363/121
86466-86828
Holo-[acyl-carrier-protein] synthase
SEQF5041|JADGLJ010000009.1
SEQF5041_02783
Genome Viewer
NA
AA
492/164
85913-86404
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02782
Genome Viewer
NA
AA
1509/503
84418-85926
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02781
Genome Viewer
NA
AA
480/160
83946-84425
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02780
Genome Viewer
NA
AA
1527/509
82231-83757
DEAD-box ATP-dependent RNA helicase CshA
SEQF5041|JADGLJ010000009.1
SEQF5041_02779
Genome Viewer
NA
AA
1356/452
80310-81665
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
SEQF5041|JADGLJ010000009.1
SEQF5041_02778
Genome Viewer
NA
AA
1071/357
79227-80297
D-alanine--D-alanine ligase
SEQF5041|JADGLJ010000009.1
SEQF5041_02777
Genome Viewer
NA
AA
1206/402
78975-77770
Peptidoglycan glycosyltransferase RodA
SEQF5041|JADGLJ010000009.1
SEQF5041_02776
Genome Viewer
NA
AA
141/47
77256-77396
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02775
Genome Viewer
NA
AA
204/68
76836-77039
hypothetical protein
SEQF5041|JADGLJ010000009.1
SEQF5041_02774
Genome Viewer
NA
AA
294/98
76528-76821
hypothetical protein
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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